PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0122s0030.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 508aa    MW: 56395.9 Da    PI: 5.1791
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0122s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.33.9e-081490169
             trihelix  1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69
                         rWt +e+l+L+ a +         e r  ++   k   + + k+mr+rgf +rs++ C+ k +++++++ ki+e+++
  Mapoly0122s0030.1.p 14 RWTLDETLTLVHALEhefgpslAWEARAANEVELKVSFQNIEKYMRHRGFsNRSANICRLKYSKMRNQFNKIQEWSQ 90
                         8***********9997777763333333334466899*************999*********************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
MEEDTVGPTY SGGRWTLDET LTLVHALEHE FGPSLAWEAR AANEVELKVS FQNIEKYMRH  60
RGFSNRSANI CRLKYSKMRN QFNKIQEWSQ VNNMDFCCLS DSAKRAEPGL YSMNLQVLEL  120
MRSILDKCGE AHGTESGQEM DSVLVPTGEG IEQMDAKRRR ERTAVPDFTP FETEFAEFED  180
SVLKTVTENR NLAGIAHADA GISPSLMADT SKLPPVRNEK TDLQTESERR MDSASEASGQ  240
RFQELEFSNT DAENWITSVG EMSELPRAEA QTAILHTDQQ SGKEIYTILE STHEEIKVAD  300
YDNAGQMPFS EKVNQDEPLG PVQEAVTSSC DDGSLRFSMA AAEGGGRQSE RREILGGGFE  360
HLIDSDLAAG PKRLTVKRQR PDMNAEQSKL SQEAKSKKQL KTAEGESGHY FEKKGTEVPA  420
NKSEMLTAIK DTAGTGFIAK SRNLTHELRE IRSKQLEITK RNLMQQKKRL GALASVVHNA  480
CAVLEGSGKS SNAFSTSPTL YRTKAMD*